Issues

• Declaring a onError block in an entry workflow

  triage/investigate
  nextflow-io/nextflow#7830 · Filter by author bentsherman opened on Oct 15, 2026

• Google batch "Read timed out" error when collecting output files, causes successful jobs to incorrectly count as a failure.

  nextflow-io/nextflow#7824 · Filter by author KurtGaastra opened on Oct 15, 2026

• 26.10 lsp does not respect Harshil alignment setting when formatting inline comments on workflow take/emit blocks

  triage/investigate
  nextflow-io/nextflow#7829 · Filter by author ScottNortonPhD opened on Oct 14, 2026
  1

• [documentation] How to "module run" on multiple sample files ?

  docslang/modules
  nextflow-io/nextflow#7817 · Filter by author tetedange13 opened on Oct 14, 2026
  2

• nf-google: relax minimal version

  executor/google-batch
  nextflow-io/nextflow#7810 · Filter by author matthdsm opened on Oct 13, 2026
  4

• Strict syntax: nested >> in workflow output path {} closure is silently not published

  triage/investigate
  nextflow-io/nextflow#7806 · Filter by author cheng-kevin opened on Oct 12, 2026
  1

• HTTP file system has no connect/read timeout: a stalled download hangs the run

  nextflow-io/nextflow#7800 · Filter by author pditommaso opened on Oct 12, 2026

• Nextflow clean -but does not consider tasks that re-ran properly, breaking caching behaviour

  nextflow-io/nextflow#7792 · Filter by author OlivierBakker opened on Oct 10, 2026

• On abort, onFlowComplete and workflow.onComplete run before onError, and a strict-syntax onError: handler fails to run

  nextflow-io/nextflow#7784 · Filter by author stefanoboriero opened on Oct 9, 2026

• nextflow lint - add CLI flag to warn/fail on use of .view and .dump operators

  nextflow-io/nextflow#7765 · Filter by author prototaxites opened on Oct 6, 2026
  4

• Officially allow merging of plugin blocks in configuration

  lang/configplugins
  nextflow-io/nextflow#7724 · Filter by author nvnieuwk opened on Sep 30, 2026
  2

• Publishing a non-work-directory file with >> in a dynamic path closure throws NPE in PublishOp.getTaskDir

  triage/investigate
  nextflow-io/nextflow#7667 · Filter by author pinin4fjords opened on Sep 23, 2026

• Consistent hangs on "Waiting for file transfers to complete (1 files)" on CephFS/K8S

  executor/k8s
  nextflow-io/nextflow#7666 · Filter by author BioWilko opened on Sep 23, 2026
  1

• TaskHasher folds the evaluated task.ext.* value, putting task.cpus back in the task hash

  nextflow-io/nextflow#7663 · Filter by author jorgee opened on Sep 22, 2026
  2

• Wave container-config env puts operational Fusion settings in the task hash

  software/wavestorage/fusion
  nextflow-io/nextflow#7662 · Filter by author jorgee opened on Sep 22, 2026

• nf-tower: interactive auth prompts hang or fail when stdin is not a terminal

  nextflow-io/nextflow#7642 · Filter by author pditommaso opened on Sep 18, 2026

• nextflow 26.04.x+ incompatible with LSF 10.1.0, Stopping a head job fails to stop compute jobs.

  executor/lsftriage/investigate
  nextflow-io/nextflow#7640 · Filter by author Rabbi-Genomics opened on Sep 18, 2026
  1

• Globstar output patterns may result in invalid move operations when scratch = true and stageOutMode = move

  triage/investigate
  nextflow-io/nextflow#7637 · Filter by author dodslaser opened on Sep 18, 2026

• Google Batch: Fusion scratch mount omitted for machines with built-in Local SSDs (-lssd)

  executor/google-batchstorage/fusion
  nextflow-io/nextflow#7627 · Filter by author adamhowardprice opened on Sep 15, 2026
  1

• Basic architecture awareness when using singularity/apptainer - container image name

  nextflow-io/nextflow#7617 · Filter by author pontus opened on Sep 13, 2026

• Basic architecture awareness when using singularity/apptainer - pulling

  nextflow-io/nextflow#7616 · Filter by author pontus opened on Sep 13, 2026
  1

• PBSPro executor spamming PBS server with requests

  executor/pbsexecutor/pbspro
  nextflow-io/nextflow#7535 · Filter by author a-chr1s opened on Aug 24, 2026

• splitCsv / CsvParser does not support RFC 4180 escaped quotes

  nextflow-io/nextflow#7529 · Filter by author AdvaitS opened on Aug 22, 2026

• AWS Batch: expose the job-termination rate limit as real config instead of reusing executor.submitRateLimit (and an internal pool name)

  executor/aws-batch
  nextflow-io/nextflow#7502 · Filter by author robsyme opened on Aug 18, 2026
  1

• nf-azure: support Microsoft Fabric OneLake as object storage

  storage/azure
  nextflow-io/nextflow#7495 · Filter by author adamrtalbot opened on Aug 17, 2026